Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NAPGGamma-soluble NSF attachment protein. (318 aa)    
Predicted Functional Partners:
VAMP4
Vesicle-associated membrane protein 4.
   
 0.992
VTI1A
Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.
   
 0.987
STX18
Syntaxin-18 isoform X1.
    
 0.985
NBAS
Neuroblastoma-amplified sequence.
    
 0.981
NSF
Vesicle-fusing ATPase isoform X1.
   
 0.980
NAPB
Beta-soluble NSF attachment protein isoform X1.
   
 0.974
VTI1B
Vesicle transport through interaction with t-SNAREs homolog 1B isoform X1.
   
 0.974
STX8
Syntaxin-8 isoform X1.
   
 0.973
STX16
Syntaxin-16 isoform X1.
    
 0.964
GOSR1
Golgi SNAP receptor complex member 1 isoform X1.
    
 0.959
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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