STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBXHMG box transcription factor BBX isoform X1. (867 aa)    
Predicted Functional Partners:
DHX15
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43.
    
   0.797
GPATCH4
G patch domain-containing protein 4 isoform X1.
    
   0.696
ATXN1
Ataxin-1 isoform X1.
    
 
 0.690
BBOX1
Gamma-butyrobetaine dioxygenase.
      
 0.686
LAP3
Cytosol aminopeptidase isoform X1.
      
 0.684
IL17RD
Interleukin-17 receptor D isoform X1.
      
 0.622
RPL26
Large subunit ribosomal protein L26e.
    
   0.591
GOT2
Aspartate aminotransferase, mitochondrial isoform X1.
      
 0.570
RSBN1
Round spermatid basic protein 1 isoform X1.
    
   0.554
PAG1
Phosphoprotein associated with glycosphingolipid-enriched microdomains 1.
      
 0.543
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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