STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERBP1Plasminogen activator inhibitor 1 RNA-binding protein isoform X1. (457 aa)    
Predicted Functional Partners:
RACK1
Guanine nucleotide-binding protein subunit beta-2-like 1 protein.
   
 
 0.996
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
   0.993
RPS3
Small subunit ribosomal protein S3e.
   
 
 0.992
RPS20
Small subunit ribosomal protein S20e.
   
   0.989
RPL23A
Large subunit ribosomal protein L23Ae.
   
   0.986
RPL5
Large subunit ribosomal protein L5e.
   
 
 0.985
RPL15
Large subunit ribosomal protein L15e.
   
   0.974
RPS15
Small subunit ribosomal protein S15e.
   
   0.974
RPL4
Large subunit ribosomal protein L4e.
   
 
 0.967
RPS5
Small subunit ribosomal protein S5e.
   
 
 0.967
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.