STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEPDC1DEP domain-containing protein 1A isoform X1. (804 aa)    
Predicted Functional Partners:
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
      
 0.597
ANLN
Actin-binding protein anillin.
   
 
 0.558
MYO9B
Myosin IXB.
   
 0.519
MYO9A
Myosin IXA.
   
 0.519
ARHGAP11A
Rho GTPase-activating protein 11A isoform X1.
   
 
 0.490
CCNB1
Cyclin B1.
   
  
 0.479
CCNB2
G2/mitotic-specific cyclin-B2 isoform X1.
   
  
 0.479
CNTD2
Cyclin N-terminal domain-containing protein 2.
   
  
 0.479
TTK
Serine/threonine-protein kinase TTK/MPS1.
   
  
 0.474
DOCK4
Dedicator of cytokinesis protein 4 isoform X1.
   
 
  0.458
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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