STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD47CD47 antigen (Rh-related antigen, integrin-associated signal transducer). (346 aa)    
Predicted Functional Partners:
LOC110086039
Tyrosine-protein phosphatase non-receptor type substrate 1-like.
   
 0.992
THBS1
Thrombospondin-1 isoform X1.
   
 0.971
THBS2
Thrombospondin 2/3/4/5.
   
 0.956
THBS4
Thrombospondin 2/3/4/5.
   
 0.944
COMP
Cartilage oligomeric matrix protein isoform X1.
   
 0.944
THBS3
Thrombospondin 2/3/4/5.
   
 0.934
ENSPVIP00000021162
annotation not available
   
 0.928
LOC110084638
T-cell surface glycoprotein CD4-like isoform X1.
    
 0.920
ENSPVIP00000024149
Tyrosine-protein phosphatase non-receptor type substrate 1-like isoform X1.
     
  0.900
RHAG
Ammonium transporter Rh type A.
    
 
 0.730
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.