Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC40Leucine-rich repeat-containing protein 40. (655 aa)    
Predicted Functional Partners:
CNPY3
Protein canopy homolog 3.
    
 0.942
MRI1
Methylthioribose-1-phosphate isomerase.
    
   0.874
SMIM12
Small integral membrane protein 12 isoform X1.
   
 
 0.732
SPEF2
Sperm flagellar protein 2-like.
    
 0.696
WLS
Protein wntless homolog.
      
 0.693
TCAIM
T-cell activation inhibitor, mitochondrial isoform X1.
   
  
 0.674
BEND7
BEN domain-containing protein 7 isoform X1.
      
 0.662
BTBD8
Uncharacterized protein KIAA1107 homolog isoform X1.
    
 
 0.659
KCTD3
BTB/POZ domain-containing protein KCTD3 isoform X1.
    
  0.658
SHKBP1
SH3KBP1-binding protein 1.
    
  0.658
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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