Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110071310Apolipoprotein A-IV-like isoform X1. (228 aa)    
Predicted Functional Partners:
APOB
LOW QUALITY PROTEIN: apolipoprotein B-100.
   
 0.999
LCAT
Phosphatidylcholine-sterol acyltransferase.
   
 0.989
APOA4
Apolipoprotein A-IV-like.
   
 
0.972
LOC110090494
Uncharacterized protein LOC110090494.
   
 0.958
APOE
Apolipoprotein E.
   
0.944
PLTP
Phospholipid transfer protein.
   
 0.928
CETP
Cholesteryl ester transfer protein.
   
 0.921
SCARB1
Scavenger receptor class B member 1 isoform X1.
    
 0.901
MIS12
Kinetochore-associated protein MIS12.
    
   0.894
APP
Amyloid beta precursor protein.
    
 0.893
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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