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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110071310Apolipoprotein A-IV-like isoform X1. (228 aa)    
Predicted Functional Partners:
APOB
LOW QUALITY PROTEIN: apolipoprotein B-100.
   
 0.984
LCAT
Phosphatidylcholine-sterol acyltransferase.
   
 0.965
APOE
Apolipoprotein E.
   
0.964
APOH
Apolipoprotein H.
   
 0.944
LIPC
Hepatic triacylglycerol lipase.
    
 0.939
LOC110090494
Uncharacterized protein LOC110090494.
   
 0.938
CETP
Cholesteryl ester transfer protein.
   
 0.935
APOM
Apolipoprotein M.
   
 
 0.924
LOC110079758
Vitellogenin-2-like.
   
 0.886
SCARB1
Scavenger receptor class B member 1 isoform X1.
    
 0.883
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.