STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000004744Parvalbumin, thymic CPV3. (79 aa)    
Predicted Functional Partners:
ENSPVIP00000001062
annotation not available
  
  0.513
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.506
WDR90
WD repeat-containing protein 90-like.
   
 0.479
ZPLD1
Zona pellucida-like domain-containing protein 1.
  
     0.471
LRGUK
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 0.442
ENSPVIP00000006312
annotation not available
   
 
 0.435
NME8
Thioredoxin domain-containing protein 3.
   
 
 0.435
ENSPVIP00000006316
annotation not available
   
 
 0.435
LOC110089136
Hemoglobin subunit alpha-1-like.
  
  
  0.431
LOC110089112
Hemoglobin subunit alpha-D-like.
  
  
  0.418
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.