STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS52VPS52 subunit of GARP complex. (679 aa)    
Predicted Functional Partners:
VPS54
Vacuolar protein sorting-associated protein 54 isoform X1.
    
 0.999
VPS53
Vacuolar protein sorting-associated protein 53 homolog.
   
 0.997
VPS51
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 51 homolog.
   
 0.994
VPS50
Syndetin.
   
 0.991
EIPR1
EARP complex and GARP complex interacting protein 1.
    
 0.969
ENSPVIP00000014724
annotation not available
   
 0.887
COG3
Conserved oligomeric Golgi complex subunit 3.
    
 0.884
COG6
Conserved oligomeric Golgi complex subunit 6.
    
 0.884
STX16
Syntaxin-16 isoform X1.
    
 0.866
COG2
Conserved oligomeric Golgi complex subunit 2 isoform X1.
   
 
 0.856
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.