Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD13CAnkyrin repeat domain-containing protein 13C. (433 aa)    
Predicted Functional Partners:
PTGDR
Prostaglandin D2 receptor.
    
 
 0.784
SEC23IP
SEC23-interacting protein.
   
  
 0.628
DLK1
Protein delta homolog 1 isoform X1.
    
   0.617
ENSPVIP00000003011
annotation not available
      
 0.565
RPL34
Large subunit ribosomal protein L34e.
      
 0.529
RPL14
Large subunit ribosomal protein L14e.
      
 0.521
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
      
 0.520
SMIM7
Small integral membrane protein 7.
      
 0.483
RPL11
60S ribosomal protein L11 isoform X1.
      
 0.479
USE1
Unconventional SNARE in the endoplasmic reticulum protein 1.
      
 0.448
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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