Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RRN3RRN3 homolog, RNA polymerase I transcription factor. (450 aa)    
Predicted Functional Partners:
TWISTNB
DNA-directed RNA polymerase I subunit RPA43.
   
 0.993
POLR1B
DNA-directed RNA polymerase I subunit RPA2.
   
 0.984
POLR1E
DNA-directed RNA polymerase I subunit RPA49.
   
 0.983
POLR1C
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 0.981
POLR1A
DNA-directed RNA polymerase I subunit RPA1.
   
 0.971
ENSPVIP00000005458
annotation not available
   
 0.971
ZNRD1
DNA-directed RNA polymerase I subunit RPA12.
   
 0.968
CD3EAP
DNA-directed RNA polymerase I subunit RPA34.
   
 0.943
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.942
TAF1C
TATA-box binding protein associated factor, RNA polymerase I subunit C.
    
 0.919
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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