STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRG1Protein FRG1. (255 aa)    
Predicted Functional Partners:
CWC22
Pre-mRNA-splicing factor CWC22 homolog.
   
   0.982
PRPF19
Pre-mRNA-processing factor 19.
    
   0.717
CDC40
Pre-mRNA-processing factor 17.
    
   0.692
SNRPF
Small nuclear ribonucleoprotein F.
    
 
 0.686
SNRPD1
Small nuclear ribonucleoprotein Sm D1.
    
 
 0.677
ENSPVIP00000022408
annotation not available
    
 
 0.644
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
 
 0.644
BCAS2
Pre-mRNA-splicing factor SPF27.
   
 
 0.601
SYF2
Pre-mRNA-splicing factor SYF2.
   
   0.598
CIR1
Corepressor interacting with RBPJ 1 isoform X1.
   
 
 0.594
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.