STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRG1Protein FRG1. (255 aa)    
Predicted Functional Partners:
CWC22
Pre-mRNA-splicing factor CWC22 homolog.
   
   0.930
SNRPF
Small nuclear ribonucleoprotein F.
    
 
 0.710
ENSPVIP00000022408
annotation not available
    
 
 0.695
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
 
 0.695
RBM8A
RNA-binding protein 8A.
   
   0.684
PRPF19
Pre-mRNA-processing factor 19.
    
   0.681
BCAS2
Pre-mRNA-splicing factor SPF27.
   
 
 0.679
CWC15
Spliceosome-associated protein CWC15 homolog.
   
 
 0.671
SYF2
Pre-mRNA-splicing factor SYF2.
   
   0.665
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 
 0.651
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.