Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NINNinein. (1916 aa)    
Predicted Functional Partners:
CCDC68
Coiled-coil domain-containing protein 68 isoform X1.
    
 
 0.964
CIB3
Calcium and integrin-binding family member 3 isoform X1.
    
 0.881
MCM7
DNA replication licensing factor MCM7.
      
 0.866
NEDD9
Enhancer of filamentation 1 isoform X1.
    
 
 0.826
DCTN1
Dynactin subunit 1.
    
 
 0.824
CEP170
Centrosomal protein of 170 kDa isoform X1.
    
 
 0.783
CCDC120
Coiled-coil domain-containing protein 120 isoform X1.
    
 
 0.750
BBS4
Bardet-Biedl syndrome 4 protein isoform X1.
    
 
 0.735
CNTRL
Centriolin.
   
 
 0.730
ARL13B
ADP-ribosylation factor-like protein 13B isoform X1.
      
 0.714
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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