Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAT1Protocadherin Fat 1 isoform X1. (4644 aa)    
Predicted Functional Partners:
SLC36A4
Solute carrier family 36 (proton-coupled amino acid transporter).
      
 0.709
WWTR1
WW domain-containing transcription regulator protein 1.
   
 
 0.631
LARGE1
LARGE xylosyl- and glucuronyltransferase 1.
      
 0.592
ATN1
Atrophin-1 (dentatorubral-pallidoluysian atrophy protein).
    
 0.584
RERE
Arginine-glutamic acid dipeptide repeats.
    
 0.584
TENM1
Teneurin-1 isoform X1.
      
 0.565
FFAR4
Free fatty acid receptor 4.
      
 0.549
CSNK1D
Casein kinase I isoform X1.
    
 0.541
CSNK1E
Casein kinase 1, epsilon.
    
 0.541
LIX1L
LIX1-like protein.
   
 0.526
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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