STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HGFACHepatocyte growth factor activator. (564 aa)    
Predicted Functional Partners:
SPINT1
Kunitz-type protease inhibitor 1.
    
 0.846
SERPING1
Plasma protease C1 inhibitor isoform X1.
   
 0.841
WDR90
WD repeat-containing protein 90-like.
   
 0.818
ENSPVIP00000006312
annotation not available
    
 0.787
NME8
Thioredoxin domain-containing protein 3.
    
 0.787
ENSPVIP00000006316
annotation not available
    
 0.787
HGF
Hepatocyte growth factor isoform X1.
   
 0.780
ENSPVIP00000015452
annotation not available
    
 0.718
C1QBP
Complement component 1 Q subcomponent-binding protein, mitochondrial.
    
  0.703
SERPINC1
Antithrombin III.
   
 0.643
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.