Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DOK4Docking protein 4. (408 aa)    
Predicted Functional Partners:
LOC110090980
Protein EFR3 homolog A isoform X1.
      
 0.904
SEMA3E
Semaphorin-3E.
      
 0.899
PHKB
Phosphorylase kinase regulatory subunit beta.
    
   0.715
NHLRC3
NHL repeat containing 3.
      
 0.696
HMG20A
High mobility group protein 20A isoform X1.
    
   0.683
RET
Proto-oncogene tyrosine-protein kinase receptor Ret isoform X1.
    
 0.668
RCOR1
REST corepressor 1.
    
   0.629
PHKA1
Phosphorylase kinase regulatory subunit alpha 1.
    
   0.617
PHKA2
Phosphorylase b kinase regulatory subunit alpha, liver isoform.
    
   0.617
ABCB7
ATP binding cassette subfamily B member 7.
      
 0.610
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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