STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERCC6DNA excision repair protein ERCC-6 isoform X1. (1474 aa)    
Predicted Functional Partners:
POLR2A
DNA-directed RNA polymerase II subunit RPB1.
    
 0.997
POLR2I
DNA-directed RNA polymerase II subunit RPB9.
    
 0.992
ERCC8
DNA excision repair protein ERCC-8 isoform X1.
    
 0.991
LEO1
RNA polymerase-associated protein LEO1.
   
 0.991
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
    
 0.990
POLR2D
DNA-directed RNA polymerase II subunit RPB4.
    
 0.986
XPA
DNA repair protein complementing XP-A cells isoform X1.
    
 0.982
DDB1
DNA damage-binding protein 1 isoform X1.
    
 0.976
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
   
 0.974
POLR2G
DNA-directed RNA polymerase II subunit RPB7.
    
 0.974
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.