Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CFDP1Craniofacial development protein 1. (285 aa)    
Predicted Functional Partners:
RUVBL1
RuvB-like protein 1 (pontin 52).
   
 
 0.932
DMAP1
DNA methyltransferase 1-associated protein 1 isoform X1.
   
 
 0.932
VPS72
Vacuolar protein sorting-associated protein 72 homolog isoform X1.
   
 
 0.930
YEATS4
YEATS domain-containing protein 4.
   
 
 0.928
ZNHIT1
Zinc finger HIT domain-containing protein 1 isoform X1.
    
 
 0.926
RUVBL2
RuvB-like protein 2.
    
 
 0.905
ACTR6
Actin-related protein 6.
   
 
 0.903
EP400
E1A binding protein p400.
    
 
 0.811
SRCAP
Snf2 related CREBBP activator protein.
    
 
 0.811
CCDC170
Coiled-coil domain-containing protein 170.
    
 
 0.739
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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