STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110087250Desmocollin-1-like. (536 aa)    
Predicted Functional Partners:
JUP
Junction plakoglobin isoform X1.
   
 0.912
PKP2
Plakophilin 2.
   
 0.866
PKP1
Plakophilin 1.
   
 0.843
LOC110077646
Desmoglein-1-beta-like.
   
 0.719
DSG2
Desmoglein 2.
   
 0.719
CTNNB1
Catenin beta-1 isoform X1.
   
 0.686
PKP3
Plakophilin-3.
   
 0.673
DST
Dystonin isoform X1.
   
 0.606
ENSPVIP00000018732
annotation not available
   
 0.606
EPPK1
Epiplakin 1.
   
 0.606
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.