MSANTD1 protein (Pogona vitticeps) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MSANTD1

Myb/SANT-like DNA-binding domain-containing protein 1. (259 aa)

Predicted Functional Partners:

SNUPN

0.678

SAP130

0.678

ENSPVIP00000028919

0.618

OSTM1

0.614

RCL1

0.605

CATSPER3

0.592

CNGA4

0.588

VWA8

0.524

RCBTB2

0.483

VPS33A

0.481

Your Current Organism:

Pogona vitticeps

NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CATSPER3	CNGA4	ENSPVIP00000001682	ENSPVIP00000028929	Cation channel sperm-associated protein 3 isoform X1.	Cyclic nucleotide-gated cation channel alpha-4.	0.568
CATSPER3	ENSPVIP00000028919	ENSPVIP00000001682	ENSPVIP00000028919	Cation channel sperm-associated protein 3 isoform X1.	Olfactory receptor 52B2-like.	0.613
CATSPER3	MSANTD1	ENSPVIP00000001682	ENSPVIP00000004884	Cation channel sperm-associated protein 3 isoform X1.	Myb/SANT-like DNA-binding domain-containing protein 1.	0.592
CATSPER3	SAP130	ENSPVIP00000001682	ENSPVIP00000032780	Cation channel sperm-associated protein 3 isoform X1.	Histone deacetylase complex subunit SAP130 isoform X1.	0.639
CATSPER3	SNUPN	ENSPVIP00000001682	ENSPVIP00000009032	Cation channel sperm-associated protein 3 isoform X1.	Snurportin-1.	0.645
CNGA4	CATSPER3	ENSPVIP00000028929	ENSPVIP00000001682	Cyclic nucleotide-gated cation channel alpha-4.	Cation channel sperm-associated protein 3 isoform X1.	0.568
CNGA4	ENSPVIP00000028919	ENSPVIP00000028929	ENSPVIP00000028919	Cyclic nucleotide-gated cation channel alpha-4.	Olfactory receptor 52B2-like.	0.678
CNGA4	MSANTD1	ENSPVIP00000028929	ENSPVIP00000004884	Cyclic nucleotide-gated cation channel alpha-4.	Myb/SANT-like DNA-binding domain-containing protein 1.	0.588
CNGA4	SAP130	ENSPVIP00000028929	ENSPVIP00000032780	Cyclic nucleotide-gated cation channel alpha-4.	Histone deacetylase complex subunit SAP130 isoform X1.	0.637
CNGA4	SNUPN	ENSPVIP00000028929	ENSPVIP00000009032	Cyclic nucleotide-gated cation channel alpha-4.	Snurportin-1.	0.645
ENSPVIP00000028919	CATSPER3	ENSPVIP00000028919	ENSPVIP00000001682	Olfactory receptor 52B2-like.	Cation channel sperm-associated protein 3 isoform X1.	0.613
ENSPVIP00000028919	CNGA4	ENSPVIP00000028919	ENSPVIP00000028929	Olfactory receptor 52B2-like.	Cyclic nucleotide-gated cation channel alpha-4.	0.678
ENSPVIP00000028919	MSANTD1	ENSPVIP00000028919	ENSPVIP00000004884	Olfactory receptor 52B2-like.	Myb/SANT-like DNA-binding domain-containing protein 1.	0.618
ENSPVIP00000028919	SAP130	ENSPVIP00000028919	ENSPVIP00000032780	Olfactory receptor 52B2-like.	Histone deacetylase complex subunit SAP130 isoform X1.	0.664
ENSPVIP00000028919	SNUPN	ENSPVIP00000028919	ENSPVIP00000009032	Olfactory receptor 52B2-like.	Snurportin-1.	0.644
MSANTD1	CATSPER3	ENSPVIP00000004884	ENSPVIP00000001682	Myb/SANT-like DNA-binding domain-containing protein 1.	Cation channel sperm-associated protein 3 isoform X1.	0.592
MSANTD1	CNGA4	ENSPVIP00000004884	ENSPVIP00000028929	Myb/SANT-like DNA-binding domain-containing protein 1.	Cyclic nucleotide-gated cation channel alpha-4.	0.588
MSANTD1	ENSPVIP00000028919	ENSPVIP00000004884	ENSPVIP00000028919	Myb/SANT-like DNA-binding domain-containing protein 1.	Olfactory receptor 52B2-like.	0.618
MSANTD1	OSTM1	ENSPVIP00000004884	ENSPVIP00000002686	Myb/SANT-like DNA-binding domain-containing protein 1.	Osteopetrosis-associated transmembrane protein 1 (chloride channel 7 beta subunit).	0.614
MSANTD1	RCBTB2	ENSPVIP00000004884	ENSPVIP00000019490	Myb/SANT-like DNA-binding domain-containing protein 1.	RCC1 and BTB domain-containing protein 2.	0.483