STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATL1Atlastin-1 isoform X1. (476 aa)    
Predicted Functional Partners:
REEP2
Receptor expression-enhancing protein 1/2/3/4.
   
 
 0.517
REEP1
Receptor accessory protein 1.
    
 
 0.481
FITM2
Fat storage-inducing transmembrane protein 2.
      
 0.481
FMR1
Synaptic functional regulator FMR1 isoform X1.
    
   0.476
RTN3
Reticulon-3 isoform X1.
    
 
 0.446
RTN1
Reticulon-1-like.
    
 
 0.446
RTN4
Reticulon-4 isoform X1.
    
 
 0.446
RTN2
Reticulon-2.
    
 
 0.446
SPART
Spartin isoform X1.
      
 0.438
SPG21
Maspardin.
      
 0.427
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.