STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFWD3Ring finger and WD repeat domain 3. (604 aa)    
Predicted Functional Partners:
RPA3
Replication protein A 14 kDa subunit.
    
 
 0.963
RPA1
Replication protein A 70 kDa DNA-binding subunit.
   
 
 0.949
PRIMPOL
DNA-directed primase/polymerase protein isoform X1.
    
 
 0.930
SMARCAL1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1.
    
 
 0.891
WRN
Werner syndrome ATP-dependent helicase isoform X1.
   
 
 0.864
RPA2
Replication protein A 32 kDa subunit.
    
 
 0.794
CASP10
Caspase-10-like.
      
 0.774
TIMELESS
Protein timeless homolog isoform X1.
   
 
 0.725
WDR59
WD repeat-containing protein 59.
      
 0.695
FADD
FAS-associated death domain protein.
      
 0.690
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.