STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLRN3Clarin-3. (225 aa)    
Predicted Functional Partners:
CBARP
CACN subunit beta associated regulatory protein.
      
 0.769
RNF24
RING finger protein 24.
      
 0.737
UBOX5
U-box domain-containing protein 5.
      
 0.696
KCTD9
BTB/POZ domain-containing protein KCTD9.
      
 0.696
GHITM
Growth hormone-inducible transmembrane protein.
      
 0.695
ENSPVIP00000001184
annotation not available
     
 0.642
TMIGD1
Transmembrane and immunoglobulin domain-containing protein 1.
   
  
 0.632
ANKRD17
Ankyrin repeat domain-containing protein 17 isoform X1.
    
 
 0.625
CCDC43
Coiled-coil domain-containing protein 43 isoform X1.
    
   0.617
ELMO2
Engulfment and cell motility 2.
    
 0.580
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.