STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRRAPTransformation/transcription domain-associated protein. (3494 aa)    
Predicted Functional Partners:
DMAP1
DNA methyltransferase 1-associated protein 1 isoform X1.
    
 0.973
TAF12
Transcription initiation factor TFIID subunit 12 isoform X1.
    
 0.972
TAF10
TATA-box binding protein associated factor 10.
    
 0.972
TAF9
TATA-box binding protein associated factor 9.
    
 0.972
TAF6
TATA-box binding protein associated factor 6.
   
 0.971
SUPT3H
Transcription initiation protein SPT3 homolog isoform X1.
    
 0.971
TADA3
Transcriptional adapter 3 isoform X1.
    
 0.971
SGF29
SAGA-associated factor 29.
    
 0.971
ENY2
ENY2 transcription and export complex 2 subunit.
    
 0.970
USP22
Ubiquitin carboxyl-terminal hydrolase 22 isoform X1.
    
 0.969
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.