Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000004953annotation not available (118 aa)    
Predicted Functional Partners:
U2AF2
Splicing factor U2AF 65 kDa subunit.
    
 
 0.699
CDC5L
Cell division cycle 5-like protein.
    
   0.587
SRSF1
Serine/arginine-rich splicing factor 1 isoform X1.
    
 
 0.546
RBM39
RNA-binding protein 39 isoform X1.
    
 
 0.516
RBM23
RNA binding motif protein 23.
    
 
 0.516
SF1
LOW QUALITY PROTEIN: splicing factor 1.
   
 
 0.507
SRSF2
Splicing factor, arginine/serine-rich 2.
   
 
 0.492
SRSF4
Splicing factor, arginine/serine-rich 4/5/6.
    
 
 0.478
LOC110076419
Serine/arginine-rich splicing factor 5-like.
    
 
 0.478
SRSF5
Splicing factor, arginine/serine-rich 4/5/6.
    
 
 0.478
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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