STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000004953annotation not available (118 aa)    
Predicted Functional Partners:
U2AF2
Splicing factor U2AF 65 kDa subunit.
    
 
 0.684
CDC5L
Cell division cycle 5-like protein.
    
   0.683
SRSF4
Splicing factor, arginine/serine-rich 4/5/6.
   
 
 0.539
LOC110076419
Serine/arginine-rich splicing factor 5-like.
   
 
 0.539
SRSF5
Splicing factor, arginine/serine-rich 4/5/6.
   
 
 0.539
SRSF6
Splicing factor, arginine/serine-rich 4/5/6.
   
 
 0.539
ZNF318
Zinc finger protein 318-like.
    
 
 0.498
RBM39
RNA-binding protein 39 isoform X1.
    
 
 0.497
RBM23
RNA binding motif protein 23.
    
 
 0.497
SRSF1
Serine/arginine-rich splicing factor 1 isoform X1.
    
 
 0.494
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.