Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCARB1Scavenger receptor class B member 1 isoform X1. (505 aa)    
Predicted Functional Partners:
APOB
LOW QUALITY PROTEIN: apolipoprotein B-100.
    
 0.903
LOC110071310
Apolipoprotein A-IV-like isoform X1.
    
 0.901
PDZK1
Na(+)/H(+) exchange regulatory cofactor NHE-RF3.
   
 
 0.768
PPARA
Peroxisome proliferator-activated receptor alpha.
    
 0.683
CYP7A1
Cholesterol 7-alpha-monooxygenase.
     
 0.668
PPARG
Peroxisome proliferator-activated receptor gamma isoform X1.
    
 0.664
BCO1
Beta,beta-carotene 15,15'-dioxygenase.
   
  
 0.663
CETP
Cholesteryl ester transfer protein.
     
 0.663
TYRP1
Tyrosinase related protein 1.
      
 0.656
TLR4
Toll-like receptor 4 isoform X1.
   
 0.649
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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