Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110071450Exosome complex component RRP45B-like. (175 aa)    
Predicted Functional Partners:
EXOSC3
Exosome complex component RRP40.
   
 0.991
EXOSC1
Exosome complex component CSL4.
   
 0.990
EXOSC2
Exosome complex component RRP4.
   
 0.988
ENSPVIP00000029685
annotation not available
   
 0.988
EXOSC5
Exosome complex component RRP46.
   
 0.986
EXOSC9
Exosome complex component RRP45 isoform X1.
   
 0.984
EXOSC7
Exosome complex component RRP42.
   
 0.982
DIS3
Exosome complex exonuclease DIS3/RRP44.
   
 0.970
C1D
Nuclear nucleic acid-binding protein C1D.
   
 0.966
EXOSC10
Exosome component 10.
   
 0.966
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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