STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEMFNuclear export mediator factor NEMF. (708 aa)    
Predicted Functional Partners:
ENSPVIP00000004997
annotation not available
 
     0.939
LOC110080384
E3 ubiquitin-protein ligase listerin-like isoform X1.
    
 0.882
LOC110076991
E3 ubiquitin-protein ligase listerin-like.
    
 0.882
TCF25
Transcription factor 25.
    
 0.880
RPL11
60S ribosomal protein L11 isoform X1.
   
 
 0.696
RPL5
Large subunit ribosomal protein L5e.
    
   0.683
RPL23A
Large subunit ribosomal protein L23Ae.
    
   0.679
ENSPVIP00000028682
annotation not available
    
   0.658
NPLOC4
Nuclear protein localization protein 4 homolog.
    
 0.656
FAAP100
Fanconi anemia core complex-associated protein 100.
    
 0.656
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.