STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEMFNuclear export mediator factor NEMF. (708 aa)    
Predicted Functional Partners:
TCF25
Transcription factor 25.
   
 0.940
ENSPVIP00000004997
annotation not available
 
     0.939
LOC110080384
E3 ubiquitin-protein ligase listerin-like isoform X1.
   
 0.881
LOC110076991
E3 ubiquitin-protein ligase listerin-like.
   
 0.881
ANKZF1
Ankyrin repeat and zinc finger domain-containing protein 1.
   
 0.847
RPL26
Large subunit ribosomal protein L26e.
    
 0.813
RPL8
Large subunit ribosomal protein L8e.
    
  0.812
RPLP0
Large subunit ribosomal protein LP0.
    
 0.790
RPL19
Large subunit ribosomal protein L19e.
    
  0.780
RPL23A
Large subunit ribosomal protein L23Ae.
    
  0.780
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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