STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATS2LSPATS2-like protein isoform X1. (571 aa)    
Predicted Functional Partners:
FAT2
Protocadherin Fat 1/2/3.
      
 0.558
ENSPVIP00000003011
annotation not available
      
 0.557
FRMPD1
FERM and PDZ domain-containing protein 1 isoform X1.
      
 0.520
TMEM51
Transmembrane protein 51.
      
 0.520
SUB1
Activated RNA polymerase II transcriptional coactivator p15.
      
 0.518
SLC2A13
MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13.
      
 0.495
TTC22
Tetratricopeptide repeat protein 22.
      
 0.482
LOC110080662
Protein FAM228B-like isoform X1.
      
 0.482
FAM135B
Family with sequence similarity 135 member B.
      
 0.471
RAB28
Ras-related protein Rab-28 isoform X1.
      
 0.400
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.