STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPS1Hermansky-Pudlak syndrome 1 protein isoform X1. (704 aa)    
Predicted Functional Partners:
ENSPVIP00000023526
annotation not available
    
 0.990
HPS3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
      
 0.703
HPS6
Hermansky-Pudlak syndrome 6 protein.
      
 0.654
HPD
4-hydroxyphenylpyruvate dioxygenase.
     
 0.623
HPDL
4-hydroxyphenylpyruvate dioxygenase-like protein.
     
 0.623
CENPX
Centromere protein X.
      
 0.617
TEPSIN
AP-4 complex accessory subunit tepsin.
      
 0.595
GTF2H1
Transcription initiation factor TFIIH subunit 1.
      
 0.573
ARGLU1
Arginine and glutamate-rich protein 1 isoform X1.
      
 0.570
RAB38
Ras-related protein Rab-38.
    
 0.475
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.