Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAR1H/ACA ribonucleoprotein complex subunit 1. (232 aa)    
Predicted Functional Partners:
DKC1
H/ACA ribonucleoprotein complex subunit 4 isoform X1.
   
 0.999
NOP10
H/ACA ribonucleoprotein complex subunit 3.
   
 0.999
NHP2
H/ACA ribonucleoprotein complex subunit 2.
   
 0.999
WRAP53
Telomerase Cajal body protein 1.
    
 0.993
FBL
RRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.988
NOP58
Nucleolar protein 58 isoform X1.
  
 
 0.973
NOP56
Nucleolar protein 56.
   
 
 0.965
SHQ1
Protein SHQ1 homolog.
   
 
 0.956
NAF1
H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1.
   
 0.955
TERT
Telomerase reverse transcriptase.
    
 0.952
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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