STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000005043LOW QUALITY PROTEIN: H-2 class I histocompatibility antigen, Q10 alpha chain-like. (252 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin.
   
 0.972
CD8A
T-cell surface glycoprotein CD8 alpha chain isoform X1.
   
 0.942
RPA2
Replication protein A 32 kDa subunit.
   
 0.921
LOC110076170
Calreticulin-like.
   
 
 0.697
CALR3
Calreticulin-3 isoform X1.
   
 
 0.697
CALR
Calreticulin.
   
 
 0.697
PDIA3
Protein disulfide-isomerase A3.
     
  0.682
THADA
Thyroid adenoma-associated protein.
    
   0.608
LOC110091135
Class II histocompatibility antigen, M alpha chain.
   
 
 0.539
ENSPVIP00000005947
SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like.
   
 
 0.467
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.