STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH20Protocadherin delta 1. (385 aa)    
Predicted Functional Partners:
PCDH7
Protocadherin-7 isoform X1.
   
  0.860
PCDH1
Protocadherin-1 isoform X1.
   
  0.624
CUTC
Copper homeostasis protein cutC homolog.
      
 0.611
FAM102B
Protein FAM102B.
      
 0.605
BRICD5
BRICHOS domain-containing protein 5.
      
 0.571
NBAS
Neuroblastoma-amplified sequence.
      
 0.569
ANKRD23
Ankyrin repeat domain-containing protein 23.
      
 0.568
TMEM37
Voltage-dependent calcium channel gamma-like subunit.
      
 0.563
ENSPVIP00000033896
annotation not available
 
 
  0.551
RAB33A
Ras-related protein Rab-33A isoform X1.
      
 0.547
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.