Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC24BProtein transport protein Sec24B isoform X1. (1227 aa)    
Predicted Functional Partners:
SEC13
Protein transport protein SEC13.
   
 0.999
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.997
SEC24A
Protein transport protein Sec24A isoform X1.
  
0.989
SEC24D
Protein transport protein Sec24D.
   
0.975
SEC24C
Protein transport protein Sec24C isoform X1.
   
0.972
SEC23A
Protein transport protein Sec23A.
   
0.970
SEC16A
SEC16 homolog A, endoplasmic reticulum export factor.
   
 0.969
SEC23B
Protein transport protein Sec23B.
   
 0.938
SAR1B
GTP-binding protein SAR1b.
   
 0.883
SAR1A
GTP-binding protein SAR1a.
   
 0.883
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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