STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R3HCC1LCoiled-coil domain-containing protein R3HCC1L. (748 aa)    
Predicted Functional Partners:
TSFM
Elongation factor Ts, mitochondrial isoform X1.
    
   0.731
CFAP206
Cilia- and flagella-associated protein 206.
      
 0.635
VPS52
VPS52 subunit of GARP complex.
      
 0.562
SARS1
Serine--tRNA ligase, cytoplasmic isoform X1.
    
   0.494
HEMK1
Release factor glutamine methyltransferase.
      
 0.480
SPEF2
Sperm flagellar protein 2-like.
      
 0.466
CEP55
Centrosomal protein of 55 kDa isoform X1.
      
 0.437
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.