Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNTN1Contactin 1. (1003 aa)    
Predicted Functional Partners:
NFASC
Neurofascin isoform X1.
   
0.988
NRCAM
Neuronal cell adhesion molecule.
   
0.965
CNTNAP1
Contactin associated protein 1.
   
 0.938
PTPRZ1
Receptor-type tyrosine-protein phosphatase zeta isoform X1.
   
 
 0.898
MCAM
Cell surface glycoprotein MUC18 isoform X1.
    
  0.787
ENSPVIP00000023544
annotation not available
    
  0.787
BCAM
Lutheran blood group glycoprotein.
    
  0.787
CNTNAP2
Contactin-associated protein-like 2.
   
 0.705
GYPC
Glycophorin C.
   
 0.705
CNTNAP5
Contactin-associated protein-like 5.
   
 0.705
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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