Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMIM12Small integral membrane protein 12 isoform X1. (172 aa)    
Predicted Functional Partners:
CCDC58
Coiled-coil domain-containing protein 58 isoform X1.
    
   0.927
MTHFSD
Methenyltetrahydrofolate synthase domain-containing protein isoform X1.
   
    0.918
UTP15
U3 small nucleolar RNA-associated protein 15 homolog.
   
  
 0.918
SNU13
U4/U6 small nuclear ribonucleoprotein SNU13.
  
   0.916
HSPA9
Stress-70 protein, mitochondrial.
  
 0.866
NIPSNAP2
Protein NipSnap homolog 2 isoform X1.
   
    0.780
NIPSNAP1
LOW QUALITY PROTEIN: protein NipSnap homolog 1.
   
    0.780
WDR6
WD repeat-containing protein 6.
   
   0.738
LRRC40
Leucine-rich repeat-containing protein 40.
   
 
 0.732
BEND7
BEN domain-containing protein 7 isoform X1.
      
 0.732
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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