STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TYW5tRNA-yW synthesizing protein 5. (297 aa)    
Predicted Functional Partners:
TYW1
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase isoform X1.
      
 0.613
TYW3
TRNA wybutosine-synthesizing protein 3 homolog.
      
 0.612
RIOX2
Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA.
      
 0.569
JMJD8
JmjC domain-containing protein 8.
      
 0.562
TRMT12
TRNA wybutosine-synthesizing protein 2 homolog.
 
    
 0.541
TRMT5
TRNA (guanine(37)-N1)-methyltransferase isoform X1.
   
  
 0.523
KCTD18
BTB/POZ domain-containing protein KCTD18.
      
 0.522
ALKBH1
Alkylated DNA repair protein alkB homolog 1.
      
 0.514
EPAS1
Endothelial PAS domain-containing protein 1 isoform X1.
    
 0.486
NPAS3
Neuronal PAS domain protein 3.
    
 0.486
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.