STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMS19MMS19 nucleotide excision repair protein homolog. (1094 aa)    
Predicted Functional Partners:
CIAO2B
Mitotic spindle-associated MMXD complex subunit MIP18.
    
 0.987
CIAO1
Probable cytosolic iron-sulfur protein assembly protein CIAO1.
    
 0.984
ENSPVIP00000000761
annotation not available
    
 0.967
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.966
FBXL5
F-box and leucine-rich repeat protein 5.
    
 
 0.951
POLD1
DNA polymerase delta catalytic subunit.
   
 0.939
PPAT
Amidophosphoribosyltransferase isoform X1.
    
 
 0.936
DNA2
DNA replication ATP-dependent helicase/nuclease DNA2.
    
 0.935
CDKAL1
Threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1.
   
 
 0.931
LOC110089270
MIP18 family protein FAM96A-like.
    
 0.927
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.