STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SATB2DNA-binding protein SATB2 isoform X1. (731 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin-conjugating enzyme E2 I.
    
  0.731
BCL11B
B-cell lymphoma/leukemia 11B isoform X1.
   
 
 0.657
ENSPVIP00000000723
annotation not available
    
 0.605
CASP6
Caspase 6.
    
 0.605
CUX1
Homeobox protein cut-like.
    
 
 0.603
SUMO1
Small ubiquitin-related modifier 1.
    
 0.597
PIAS1
E3 SUMO-protein ligase PIAS1 isoform X1.
    
 0.572
PIAS3
E3 SUMO-protein ligase PIAS3 isoform X1.
    
 0.572
PIAS4
Protein inhibitor of activated STAT 4.
    
  0.568
LOC110084328
Caspase-7-like.
    
 0.565
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.