Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RRP12Ribosomal RNA-processing protein 12. (1336 aa)    
Predicted Functional Partners:
BYSL
Essential nuclear protein 1.
   
 
 0.994
TSR1
Pre-rRNA-processing protein TSR1 homolog.
   
 
 0.994
NAT10
RNA cytidine acetyltransferase.
   
 
 0.993
PWP2
Periodic tryptophan protein 2 homolog.
   
 
 0.991
CEBPZ
CCAAT/enhancer-binding protein zeta isoform X1.
   
 
 0.988
PDCD11
Programmed cell death 11.
   
 
 0.987
BMS1
Ribosome biogenesis protein BMS1 homolog.
   
 
 0.986
NOC4L
U3 small nucleolar RNA-associated protein 19.
   
 
 0.983
NOP14
NOP14 nucleolar protein.
   
 
 0.983
UTP14A
U3 small nucleolar RNA-associated protein 14 homolog A.
   
 
 0.977
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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