STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110070277Hematopoietic lineage cell-specific protein-like. (557 aa)    
Predicted Functional Partners:
GOSR1
Golgi SNAP receptor complex member 1 isoform X1.
   
 0.808
GOLGA2
Golgin A2.
   
 
 0.770
USO1
General vesicular transport factor p115 isoform X1.
   
 0.763
ACBD3
Golgi resident protein GCP60 isoform X1.
    
 0.712
ENSPVIP00000000686
annotation not available
    
 0.680
STX5
Syntaxin 5.
    
 0.680
CSK
Tyrosine-protein kinase CSK.
   
 0.566
IFT20
Intraflagellar transport protein 20 homolog.
   
 0.540
MUSK
Muscle, skeletal receptor tyrosine-protein kinase.
    
 0.515
TUBG1
Tubulin gamma-1 chain.
   
 0.512
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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