STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CROTPeroxisomal carnitine O-octanoyltransferase isoform X1. (612 aa)    
Predicted Functional Partners:
SCP2
Non-specific lipid-transfer protein.
   
 
 0.857
PEX10
Peroxisome biogenesis factor 10.
     
 0.737
PEX16
Peroxisomal biogenesis factor 16.
      
 0.679
PEX13
Peroxisome biogenesis factor 13.
     
 0.677
PEX12
Peroxisome assembly protein 12.
     
 0.676
HADHB
Trifunctional enzyme subunit beta, mitochondrial isoform X1.
   
  
 0.669
PEX5L
PEX5-related protein isoform X1.
     
 0.610
PEX5
Peroxisomal biogenesis factor 5 isoform X1.
     
 0.610
TYSND1
Peroxisomal leader peptide-processing protease.
     
 0.582
HADH
Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial.
   
  
 0.572
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.