STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CROTPeroxisomal carnitine O-octanoyltransferase isoform X1. (612 aa)    
Predicted Functional Partners:
SCP2
Non-specific lipid-transfer protein.
   
 
 0.801
PEX12
Peroxisome assembly protein 12.
     
 0.770
GNPAT
Dihydroxyacetone phosphate acyltransferase isoform X1.
     
 0.759
ACOX3
Peroxisomal acyl-coenzyme A oxidase 3.
   
 
 0.755
HADHB
Trifunctional enzyme subunit beta, mitochondrial isoform X1.
   
  
 0.745
AMACR
Alpha-methylacyl-CoA racemase.
     
 0.719
RUNDC3B
RUN domain-containing protein 3B isoform X1.
      
 0.693
LOC110077088
Enoyl-CoA delta isomerase 2, mitochondrial-like.
   
 
 0.693
ENSPVIP00000030595
annotation not available
   
 
 0.693
PEX5
Peroxisomal biogenesis factor 5 isoform X1.
     
 0.675
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.