Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4639S ribosomal protein L46, mitochondrial. (277 aa)    
Predicted Functional Partners:
MRPL55
39S ribosomal protein L55, mitochondrial.
   
 0.985
MRPL44
39S ribosomal protein L44, mitochondrial.
   
 0.983
MRPL40
39S ribosomal protein L40, mitochondrial.
   
 
 0.982
MRPL2
39S ribosomal protein L2, mitochondrial.
   
 0.982
MRPL47
39S ribosomal protein L47, mitochondrial.
   
 0.982
MRPL16
39S ribosomal protein L16, mitochondrial.
   
 0.982
MRPL12
39S ribosomal protein L12, mitochondrial.
   
 0.981
MRPL15
39S ribosomal protein L15, mitochondrial.
   
 0.977
MRPL21
Mitochondrial ribosomal protein L21.
   
 0.976
MRPS11
28S ribosomal protein S11, mitochondrial.
   
 
 0.975
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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