Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AGBL1Cytosolic carboxypeptidase protein 4. (1195 aa)    
Predicted Functional Partners:
CCDC87
Coiled-coil domain-containing protein 87.
   
  
 0.694
KHNYN
Protein KHNYN isoform X1.
      
 0.667
TTLL4
Tubulin tyrosine ligase like 4.
    
 
 0.641
KANK4
KN motif and ankyrin repeat domain-containing protein 4.
    
 
 0.634
SLC4A11
Solute carrier family 4 member 11.
      
 0.624
TTLL2
Probable tubulin polyglutamylase TTLL2.
      
 0.616
LOXHD1
Lipoxygenase homology domains 1.
     
 0.573
LOC110080238
Lipoxygenase homology domain-containing protein 1-like isoform X1.
     
 0.573
NFXL1
NF-X1-type zinc finger protein NFXL1.
      
 0.478
RTN4R
Reticulon-4 receptor.
     
 0.472
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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