STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOPCGolgi-associated PDZ and coiled-coil motif-containing protein. (444 aa)    
Predicted Functional Partners:
CFTR
Cystic fibrosis transmembrane conductance regulator.
    
 0.983
ENSPVIP00000001156
annotation not available
    
 0.714
RHOQ
Rho-related GTP-binding protein RhoQ.
    
 0.714
RHOJ
Rho-related GTP-binding protein RhoJ.
    
 0.714
TTC26
Tetratricopeptide repeat domain 26.
    
 0.683
PICK1
PRKCA-binding protein.
    
 0.672
RHOH
Ras homolog family member H.
    
 0.656
SPATA16
Spermatogenesis-associated protein 16 isoform X1.
      
 0.602
CCDC62
Coiled-coil domain containing 62.
      
 0.592
WIPI2
WD repeat domain phosphoinositide-interacting protein 2 isoform X1.
      
 0.561
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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