STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRPA1U2 small nuclear ribonucleoprotein A. (256 aa)    
Predicted Functional Partners:
SNW1
SNW domain-containing protein 1.
   
 0.999
BUD31
Bud site selection protein 31.
   
 0.999
SNRPD1
Small nuclear ribonucleoprotein Sm D1.
   
 0.999
CDC40
Pre-mRNA-processing factor 17.
    
 0.999
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.999
CDC5L
Cell division cycle 5-like protein.
   
 0.999
SF3A2
Splicing factor 3A subunit 2.
    
 0.999
SF3B2
Splicing factor 3b subunit 2.
   
 0.999
SNRPC
U1 small nuclear ribonucleoprotein C.
   
 0.999
SNRPE
Small nuclear ribonucleoprotein E.
   
 0.999
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.