STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SELENOSSelenoprotein S. (180 aa)    
Predicted Functional Partners:
DERL1
Derlin-1.
   
 0.975
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
    
 0.972
SELENOK
Selenoprotein K.
   
 
 0.943
LOC110082643
Transitional endoplasmic reticulum ATPase-like.
    
 0.931
DERL3
Uncharacterized LOC110081966.
   
 0.907
DERL2
Derlin-2/3.
   
 0.907
SELENOT
Selenoprotein T.
      
 0.904
KLHDC2
Kelch domain-containing protein 2.
    
 
 0.899
SELENOF
Selenoprotein F.
   
  
 0.888
SELENON
LOW QUALITY PROTEIN: selenoprotein N.
      
 0.886
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.