Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
METAP1Methionine aminopeptidase 1. (386 aa)    
Predicted Functional Partners:
METAP2
Methionine aminopeptidase 2 isoform X1.
    
 0.982
LOC110090046
Large subunit ribosomal protein L17e.
  
 
 0.932
CBWD1
COBW domain-containing protein 1-like.
    
 
 0.912
RPL5
Large subunit ribosomal protein L5e.
  
 
 0.911
ENSPVIP00000028682
annotation not available
  
 
 0.902
RPS11
Small subunit ribosomal protein S11e.
  
 
 0.898
RPS5
Small subunit ribosomal protein S5e.
  
 
 0.897
RPS15
Small subunit ribosomal protein S15e.
  
   0.890
RPL23A
Large subunit ribosomal protein L23Ae.
  
 
 0.886
RPL11
60S ribosomal protein L11 isoform X1.
  
 
 0.872
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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