Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LINS1Protein Lines homolog 1. (767 aa)    
Predicted Functional Partners:
PLRG1
Pleiotropic regulator 1 isoform X1.
    
   0.852
PRPF19
Pre-mRNA-processing factor 19.
    
   0.772
BCAS2
Pre-mRNA-splicing factor SPF27.
    
   0.531
LOC110091279
Neural proliferation differentiation and control protein 1-like isoform X1.
      
 0.447
NPDC1
Neural proliferation, differentiation and control 1.
      
 0.447
ADGB
Androglobin.
      
 0.436
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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